AMBER: ptraj problem

From: Abd Ghani Abd Aziz <>
Date: Thu, 4 Nov 2004 17:53:39 -0800 (PST)

Dear amber users,

i have an error message when running ptraj using
amber8. it seems that ptraj cannot read my crd files..
can somebody help me to solve this problem? when i
look at the 1jkmpro3.out i found that there is a
message :

check COM velocity, temp: 0.002752
  Unit 16 Error on OPEN:

Could not open file (1jkmpro3.crd) with mode (r)
WARNING in checkCoordinates(): Could not open file
WARNING in ptrajSetupIO(): trajin 1jkmpro3.crd, cannot
open file...

best regards

Abd Ghani

Do You Yahoo!?
Tired of spam? Yahoo! Mail has the best spam protection around
The AMBER Mail Reflector
To post, send mail to
To unsubscribe, send "unsubscribe amber" to
Received on Fri Nov 05 2004 - 02:53:00 PST
Custom Search