RE: Re: AMBER: errors in SGI

From: Ross Walker <ross.rosswalker.co.uk>
Date: Thu, 14 Oct 2004 09:34:46 -0700

> mpirun -np 16 mm_pbsa.pl mm_pbsa.in >mm_pbsa.log < /dev/null
> the sander is paralleled,but the following nmode program is
> not paralleled.
> What's the problem?

Nmode is not a parallel program and so will only run on 1 cpu. Only sander
and pmemd are designed to run in parallel.

All the best
Ross

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|\oss Walker

| Department of Molecular Biology TPC15 |
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Received on Thu Oct 14 2004 - 17:53:00 PDT
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