AMBER: The question about SAS calculation in MM_PBSA

From: Jack Lei <>
Date: Mon, 20 Sep 2004 13:19:29 -0400

Hi, folks:

Now we know MSMS is good in surface calculation. In MM_PBSA,
AMBER used MOLSURF to calculate SAS surface area. I am just
curious that anybody tried this using MSMS instead of MOLSURF.
What is the difference of results? If good, a suggestion is that AMBER
 could add MS option choice(like MS =0, 1, 2).


The AMBER Mail Reflector
To post, send mail to
To unsubscribe, send "unsubscribe amber" to
Received on Mon Sep 20 2004 - 18:53:00 PDT
Custom Search