I have error messages as follow:
> mol=loadpdb 3hvp.pdb
Loading PDB file: ./3hvp.pdb
Unknown residue: ABA number: 66 type: Nonterminal
Unknown residue: ABA number: 94 type: Nonterminal
Creating new UNIT for residue: ABA sequence: 67
One sided connection. Residue: missing connect0 atom.
Created a new atom named: N within residue: .R<ABA 67>
Created a new atom named: CA within residue: .R<ABA
67>
Created a new atom named: C within residue: .R<ABA 67>
Created a new atom named: O within residue: .R<ABA 67>
Created a new atom named: CB within residue: .R<ABA
67>
Created a new atom named: CG within residue: .R<ABA
67>
One sided connection. Residue: missing connect1 atom.
Creating new UNIT for residue: ABA sequence: 95
One sided connection. Residue: missing connect0 atom.
Created a new atom named: N within residue: .R<ABA 95>
Created a new atom named: CA within residue: .R<ABA
95>
Created a new atom named: C within residue: .R<ABA 95>
Created a new atom named: O within residue: .R<ABA 95>
Created a new atom named: CB within residue: .R<ABA
95>
Created a new atom named: CG within residue: .R<ABA
95>
One sided connection. Residue: missing connect1 atom.
total atoms in file: 758
Leap added 791 missing atoms according to residue
templates:
791 H / lone pairs
The file contained 12 atoms not in residue templates
Please help!
Lao_3
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Received on Tue Aug 10 2004 - 19:53:01 PDT
