AMBER: How to covalently bind a ligand to a residue?

From: Ozlem Demir <demir.qtp.ufl.edu>
Date: Thu, 5 Aug 2004 11:54:19 -0400 (EDT)

Hi All,

I wanna combine a sugar ligand to a Tyr residue from its O atom. I have prep
file for the ligand from Glycam. I also modified Tyr by deleting the H of Tyr
hydroxyl and formed a new prep file for Tyrosyl. Can anybody help me how to bond
these covalently and form a new prep file for the ligand bound Tyrosyl group?

Best,

O.D.

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Received on Thu Aug 05 2004 - 17:53:00 PDT