>From: "David A. Case" <case.scripps.edu>
>Reply-To: amber.scripps.edu
>To: amber.scripps.edu
>Subject: Re: Re: AMBER: NB pairs exceeds?
>
>On Fri, Jul 16, 2004, Chen wrote:
>
> > But I think maybe there is something wrong with
> > Leap,becaue after I solvate the DNA fragment,the density of the system is
> > about 2.0g/cc when the buffer is 8.0;but it is about 1.0g/cc when the buffer
> > is 5.0.
> > Further more,the pdb file of the solvated system looks very strange--only
> > part of the fragment is solvated!
>
> What machine, operating system, and compiler are you using for the LEaP step?
Intel PC, Redhat linux 9,and PGI compiler.Thank you.
>
> ...dac
>
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Received on Sat Jul 17 2004 - 11:53:01 PDT
