AMBER: Reproducing the energy during restart in MD!

From: Pradipta Bandyopadhyay <pradipta_b.mail.jnu.ac.in>
Date: Wed, 19 May 2004 12:03:27 +0530

Hi,

  How to recalculate the last point of my trajectory using IRES=1?
It seems NSTLIM=1 means 1 MD step. I just want to check the
last point of my trajectory and get the energy in a new calculation
without doing any MD (something like NSTLIM=0 - I tried this
but output says NSTEP=1 ).

thanks.

       Pradipta


-------------------------------------------

I am using AMBER 7

my restart input is:

&cntrl
   IREST = 1, ibelly= 0,
   IG=71277,
   NTX = 5,
   IGB=1,
   NTB = 0,
   NTT = 0, TAUTP = .5,
   TEMPI = 300.0,
   TEMP0 = 300.0,
   DTEMP = 0.0, NTP = 0,
   NSTLIM= 1, DT = .001,
   NTC = 2,
   NTF = 2,
   NTPR = 1, NTWX = 5,NMROPT =0,
   NTR=0
 &end




-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Wed May 19 2004 - 07:53:01 PDT
Custom Search