RE: AMBER: understanding SANDER source code

From: Yong Duan <yduan.udel.edu>
Date: Sun, 21 Mar 2004 21:32:03 -0500

In those good-old days, this could be achieved relatively easily using
perftrace, flowtrace, and other performance monitoring utility programs
on supercomputers. There is a similar utility program on Linux, called
gprof which might be helpful to you. I must admit that I have not used
gprof myself. But it appears to be an interesting lead.

Good luck!

yong


>
> On Sat, 20 Mar 2004, myang wrote:
>
> > I am trying to understand sander source code line by line,
> and find it's
> > rather frustrating. Can anyone share his/her experience? Or
> where can I find
> > the basic frame, like a flow chart, for sander. Thanks!
> >
> > Best & Regards,
> > Yang
> >
> --------------------------------------------------------------
> ---------
> The AMBER Mail Reflector
> To post, send mail to amber.scripps.edu
> To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
>

-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Mon Mar 22 2004 - 02:53:00 PST
Custom Search