Dear all,
I have a naive question. How should I use prep and frcmod files which I download from amber parameter database, to generate prmtop and prmcrd files for a cofactor I have pdb file. Do I need to modify atom types in my pdb file? Also how to construct a larger system which has this cofactor?
Thanks!
JF
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Received on Mon Feb 23 2004 - 19:53:00 PST
