Re: AMBER: Pseudouridine force field parameters

From: Pascal Auffinger <P.Auffinger.ibmc.u-strasbg.fr>
Date: Sun, 30 Nov 2003 16:58:30 +0100

Pete,

They are several publications of our group that deal with pseudouridines.
See for example :
JMB 1997 269 326 (contains charges)
Biophys 1999 76 50
and a review " Effects of pseudourydilation on tRNA hydration and dynamics :
a theoretical approach" 1998. (the pdf is available at
http://www-ibmc.u-strasbg.fr/upr9002/westhof/biblio_pascal.html)

best,

pascal

> All:
>
> Does anyone have a set of force field parameters for psuedouridine? Or,
> can someone point me to where I might find them? I admit I have not
> searched long and hard but a cursory search did not turn up much useful.
> Thanks.
>
> Pete Gannett
>
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pascal auffinger
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Received on Wed Jan 14 2004 - 15:53:02 PST
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