Re: AMBER: problem with pdb files

From: Bill Ross <>
Date: Mon, 13 Oct 2003 10:12:41 -0700 (PDT)

> you can test it by taking a pdb (from the data
> base) file and load it into leap ..then save topology and crd file and
> transform them into pdb file with ambpdb (with -aatm option)...then you
> will get a tipical Amber pdb file and then you can compare it with your file.

Another way to see pdb that leap can read is to

> savepdb DG dg.pdb

for any residue.

Bill Ross

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Received on Mon Oct 13 2003 - 18:53:01 PDT
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