AMBER: improper

From: Li Ying <bj_0206.yahoo.com>
Date: Tue, 30 Sep 2003 13:08:11 -0700 (PDT)

Dear Amber users,
 
When making a prep file for Leap, which atoms should be considered in improper term? Should all sp2 atoms be defined in improper. I checked all_nuc94.in file in amber7, found that C4 and C5 of DG and DA are not in improper terms.
 
Thanks for your help.
Ying



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Received on Tue Sep 30 2003 - 21:53:01 PDT
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