>===== Original Message From "Robert Duke" <rduke.email.unc.edu> =====
    >Chris -
    >Some quick comments about timings on sander6, sander7, and pmemd....
    Case closed - Thank you very much.  It all makes sense.
    As you predicted, here is the logfile from an 8 SGI CPU  PME/MD:
                   Parallel Profiling Results
                              A
                      N       n
              F       o       g
              X       n       B       S       R       O       T
              d       b       n       h       u       t       o
              i       o       d       a       n       h       t
      P       s       n       D       k       m       e       a
      E       t       d       i       e       d       r       l
    ---------------------------------------------------------------------
      0  6102.1 73130.3  9809.0   466.8   606.7   327.2 90442.0
      1  6471.5 82723.9   239.2   373.4   716.0    16.0 90540.0
      2  6506.9 83048.6     1.4   409.0   688.6    17.3 90671.8
      3  6499.1 83075.0     1.3   410.1   680.2    16.8 90682.5
      4  6497.5 83073.2     1.3   400.2   686.4    16.7 90675.4
      5  6504.6 83074.5     1.4   401.4   681.4    14.8 90678.2
      6  6496.2 83061.4     1.3   371.0   703.3    15.4 90648.5
      7  6472.2 83014.8     1.4   350.3   732.4    14.6 90585.7
     av  6443.8 81775.2  1257.0   397.8   686.9
    std   129.7  3269.4  3233.3    32.8    34.8
    min  6102.1 73130.3     1.2   350.3   606.7
    max  6506.9 83075.0  9809.0   466.8   732.4
    and here is a job of the same size on my dual Xeon:
                              A
                      N       n
              F       o       g
              X       n       B       S       R       O       T
              d       b       n       h       u       t       o
              i       o       d       a       n       h       t
      P       s       n       D       k       m       e       a
      E       t       d       i       e       d       r       l
    ----------- ----------------------------------------------------------
      0  1628.2 103843.7  2862.6   452.4  1169.8   119.5110076.3
      1  1734.1 107054.3     0.2   361.6  1213.7    60.1110424.0
     av  1681.1 105449.0  1431.4   407.0  1191.8
    std    53.0   1605.3  1431.2    45.4    22.0
    min  1628.2 103843.7     0.2   361.6  1169.8
    max  1734.1 107054.3  2862.6   452.4  1213.7
    Thanks very much
    Chris
Chris Moth
chris.moth.vanderbilt.edu
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Received on Tue Sep 16 2003 - 03:53:00 PDT