Re: non bonded pair list

From: David A. Case <case.scripps.edu>
Date: Thu, 24 Apr 2003 16:24:37 -0700

On Thu, Apr 24, 2003, Jean-François Taly wrote:
>
> I want to check the number of the non bonded pairs during the
> calculation, but I did'nt find any option for printing that.
> could any one tell me how to do that?

You don't say what program you are using....sander prints out a line
labelled "SIZE OF NONBOND LIST" at the beginning of the calculation. If
you need to monitor this number after that, you will have to modify the code,
as far as I remember.

...good luck...dac

-- 
==================================================================
David A. Case                     |  e-mail:      case.scripps.edu
Dept. of Molecular Biology, TPC15 |  fax:          +1-858-784-8896
The Scripps Research Institute    |  phone:        +1-858-784-9768
10550 N. Torrey Pines Rd.         |  home page:                   
La Jolla CA 92037  USA            |    http://www.scripps.edu/case
==================================================================
Received on Fri Apr 25 2003 - 00:53:01 PDT
Custom Search