Thanks,
I figured out the problem, but when i try to save the prmtop and inpcrd
files, i get an error that says i cannot add the bond.
"David A. Case"
<CBayse_at_odu.edu>
> cc: amber_at_heimdal.compchem.ucsf.edu
Subject: Re: bond command
02/05/03 01:30 AM
Please respond to
amber
On Wed, Feb 05, 2003, Craig A Bayse wrote:
>
> > bond ptres.136.sg ptres.568.sg
> bond: Argument #1 is type String must be of type: [atom]
> usage: bond <atom1> <atom2> [order]
>
Atom names are case sensitive: try SG rather than sg. The "desc" command
can always be used to help you decide what LEaP knows about at any
particular point.
..hope this helps...dac
--
==================================================================
David A. Case | e-mail: case_at_scripps.edu
Dept. of Molecular Biology, TPC15 | fax: +1-858-784-8896
The Scripps Research Institute | phone: +1-858-784-9768
10550 N. Torrey Pines Rd. | home page:
La Jolla CA 92037 USA | http://www.scripps.edu/case
==================================================================
Received on Wed Feb 05 2003 - 13:30:36 PST
