What is the proper command line syntax for pdb_to_mass? When I enter
"pdb_to_mass" followed by the pdb filename I get this output (to a file
if a filename follows the pdb filename):
1.01 16.00 12.00 error in mass parsing 1
error in mass parsing 2
12.00 1.01 16.00 12.00 1.01 14.00 12.00
1.01 12.00 1.01 12.00 14.00 1.01 1.01 14.00
12.00 16.00
12.00 1.01 12.00 error in mass parsing 1
error in mass parsing 2
16.00 30.97 16.00 16.00 16.00 12.00 error in mass parsing 1
error in mass parsing 2
12.00
1.01 16.00 12.00 1.01 14.00 12.00 1.01 12.00
1.01 12.00
14.00 1.01 1.01 14.00 12.00 16.00 12.00 1.01 12.00
error in mass parsing 1
error in mass parsing 2
16.00
30.97 16.00 16.00 16.00 12.00 error in mass parsing 1
error in mass parsing 2
12.00 1.01 16.00 12.00 1.01
14.00 12.00 1.01 14.00 12.00 12.00 14.00 1.01
1.01 14.00
12.00 1.01 14.00 12.00 12.00 1.01 12.00 error in mass
parsing 1
error in mass parsing 2
16.00 30.97 16.00
16.00 16.00 12.00 error in mass parsing 1
error in mass parsing 2
12.00 1.01 16.00 12.00 1.01 14.00 12.00
1.01 12.00 1.01 12.00 14.00 1.01 1.01 14.00
12.00 16.00
12.00 1.01 12.00 error in mass parsing 1
error in mass parsing 2
16.00 30.97 16.00 16.00 16.00 12.00 error in mass parsing 1
error in mass parsing 2
12.00
1.01 16.00 12.00 1.01 14.00 12.00 1.01 14.00
12.00 12.00
16.00 14.00 1.01 12.00 14.00 1.01 1.01 14.00
12.00 12.00
1.01 12.00 error in mass parsing 1
error in mass parsing 2
16.00 30.97 16.00 16.00 16.00 12.00 error in mass parsing 1
error in mass parsing 2
12.00 1.01
16.00 12.00 1.01 14.00 12.00 1.01 12.00 1.01
12.00 14.00
1.01 1.01 14.00 12.00 16.00 12.00 1.01 12.00 error in
mass parsing 1
error in mass parsing 2
16.00 30.97
16.00 16.00 16.00 12.00 error in mass parsing 1
error in mass parsing 2
12.00 1.01 16.00 12.00 1.01 14.00
12.00 1.01 14.00 12.00 12.00 16.00 14.00 1.01
12.00 14.00
1.01 1.01 14.00 12.00 12.00 1.01 12.00 error in mass
parsing 1
error in mass parsing 2
16.00 30.97 16.00
16.00 16.00 12.00 error in mass parsing 1
error in mass parsing 2
12.00 1.01 16.00 12.00 1.01 14.00 12.00
1.01 12.00 12.00 1.01 1.01 1.01 12.00 16.00
14.00 1.01
12.00 16.00 12.00 1.01 12.00 error in mass parsing 1
error in mass parsing 2
16.00 30.97 16.00 16.00 16.00
12.00 error in mass parsing 1
error in mass parsing 2
12.00 1.01 16.00 12.00 1.01 14.00 12.00 1.01 14.00
12.00 12.00 16.00 14.00 1.01 12.00 14.00 1.01
1.01 14.00
12.00 12.00 1.01 12.00 error in mass parsing 1
error in mass parsing 2
16.00 30.97 16.00 16.00 16.00 12.00
error in mass parsing 1
error in mass parsing 2
12.00 1.01 16.00 12.00 1.01 14.00 12.00 1.01
14.00 12.00
12.00 16.00 14.00 1.01 12.00 14.00 1.01 1.01
14.00 12.00
12.00 1.01 12.00 error in mass parsing 1
error in mass parsing 2
16.00 1.01 1.01 16.00 12.00 error in mass parsing 1
error in mass parsing 2
12.00 1.01
16.00 12.00 1.01 14.00 12.00 1.01 12.00 1.01
12.00 14.00
1.01 1.01 14.00 12.00 16.00 12.00 1.01 12.00 error in
mass parsing 1
error in mass parsing 2
16.00 30.97
16.00 16.00 16.00 12.00 error in mass parsing 1
error in mass parsing 2
12.00 1.01 16.00 12.00 1.01 14.00
12.00 1.01 12.00 1.01 12.00 14.00 1.01 1.01
14.00 12.00
16.00 12.00 1.01 12.00 error in mass parsing 1
error in mass parsing 2
16.00 30.97 16.00 16.00 16.00 12.00
error in mass parsing 1
error in mass parsing 2
12.00 1.01 16.00 12.00 1.01 14.00 12.00 1.01
14.00 12.00
12.00 14.00 1.01 1.01 14.00 12.00 1.01 14.00
12.00 12.00
1.01 12.00 error in mass parsing 1
error in mass parsing 2
16.00 30.97 16.00 16.00 16.00 12.00 error in mass parsing 1
error in mass parsing 2
12.00 1.01
16.00 12.00 1.01 14.00 12.00 1.01 12.00 1.01
12.00 14.00
1.01 1.01 14.00 12.00 16.00 12.00 1.01 12.00 error in
mass parsing 1
error in mass parsing 2
16.00 30.97
16.00 16.00 16.00 12.00 error in mass parsing 1
error in mass parsing 2
12.00 1.01 16.00 12.00 1.01 14.00
12.00 1.01 14.00 12.00 12.00 16.00 14.00 1.01
12.00 14.00
1.01 1.01 14.00 12.00 12.00 1.01 12.00 error in mass
parsing 1
error in mass parsing 2
16.00 30.97 16.00
16.00 16.00 12.00 error in mass parsing 1
error in mass parsing 2
12.00 1.01 16.00 12.00 1.01 14.00 12.00
1.01 12.00 1.01 12.00 14.00 1.01 1.01 14.00
12.00 16.00
12.00 1.01 12.00 error in mass parsing 1
error in mass parsing 2
16.00 30.97 16.00 16.00 16.00 12.00 error in mass parsing 1
error in mass parsing 2
12.00
1.01 16.00 12.00 1.01 14.00 12.00 1.01 14.00
12.00 12.00
16.00 14.00 1.01 12.00 14.00 1.01 1.01 14.00
12.00 12.00
1.01 12.00 error in mass parsing 1
error in mass parsing 2
16.00 30.97 16.00 16.00 16.00 12.00 error in mass parsing 1
error in mass parsing 2
12.00 1.01
16.00 12.00 1.01 14.00 12.00 1.01 12.00 12.00
1.01 1.01
1.01 12.00 16.00 14.00 1.01 12.00 16.00 12.00
1.01 12.00
error in mass parsing 1
error in mass parsing 2
16.00 30.97 16.00 16.00 16.00 12.00 error in mass parsing 1
error in mass parsing 2
12.00 1.01 16.00 12.00
1.01 14.00 12.00 1.01 14.00 12.00 12.00 16.00
14.00 1.01
12.00 14.00 1.01 1.01 14.00 12.00 12.00 1.01 12.00
error in mass parsing 1
error in mass parsing 2
16.00
30.97 16.00 16.00 16.00 12.00 error in mass parsing 1
error in mass parsing 2
12.00 1.01 16.00 12.00 1.01
14.00 12.00 1.01 14.00 12.00 12.00 16.00 14.00
1.01 12.00
14.00 1.01 1.01 14.00 12.00 12.00 1.01 12.00 error in
mass parsing 1
error in mass parsing 2
16.00 1.01
Received on Fri Jan 10 2003 - 12:42:35 PST
