You are right. I was missing the "imaging" step of the trajectory
post-processing before visualization.
Thanks to everybody who replied.
--- Holger Gohlke <gohlke_at_scripps.edu> wrote:
> Hi,
> Your pictures look pretty normal to me. You probably did not image
> your
> snapshots before extracting them from the trajectory? During your
> simulation, the water molecules diffused to the surrounding boxes of
> your periodic boundary setup.
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Received on Wed Sep 11 2002 - 19:40:05 PDT
