On Fri, Aug 09, 2002, Andreas Kerzmann wrote:
>
> I am new to the AMBER system and wanted to run the methane tutorial but
> that didn't work. When entering the sander command
>
> % sander_classic -O \
> -i min.in \
> -p mebox.top \
> -c mebox.crd \
> -o min.out \
> -r min.rst
>
> the program complained:
>
> ****** FORTRAN RUN-TIME SYSTEM ******
> Error 1092: variable not in NAMELIST group
> Location: the READ statement at line 735 of "_mdread_.f"
> Unit: 5
> File: min.in
> Abort (core dumped)
>
Works for me....are you sure you are running sander_classic and not sander?
Some machines give better error messages (indicate which variable the
program didn't like). You might check carefully the error messages on
different machines to see if they can be of help.
..good luck...dac
--
==================================================================
David A. Case | e-mail: case_at_scripps.edu
Dept. of Molecular Biology, TPC15 | fax: +1-858-784-8896
The Scripps Research Institute | phone: +1-858-784-9768
10550 N. Torrey Pines Rd. | home page:
La Jolla CA 92037 USA | http://www.scripps.edu/case
==================================================================
Received on Fri Aug 09 2002 - 08:50:27 PDT
