protonation pH dependent

From: Cozmuta <>
Date: Thu 8 Aug 2002 14:14:46 -0700 (PDT)


I looked into the amber e-mail archive if there is anything related to
protonation of proteins according to a certain pH. The only thing I could
find was something related to dynamics with different pH conditions but it
is from 2000.
What I want to do is sort of assign automatically protons to my protein
corresponding to different pH values. I thought that the protonate program
might have such an option but the only comment in the manual is that it
may be useful to try and use pol_h.
Is this the most up to date status in this matter (of protonation pH

Thank you,
Received on Thu Aug 08 2002 - 14:14:46 PDT
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