HI,
I have just built a homology model of a cyochrome with heme and minimized
it in amber. I was wondering if there is a way to optimize the sidechains
by performing dynamics.
I couldn't use implicit solvent (problem with the heme Fe) and the system
is too big for explicit solvent simulations.
Any suggestions?
Thanx
Mahadevan
Received on Thu Aug 01 2002 - 14:15:52 PDT
