RE: xaLeap make fails on AIX

From: Thomas A. Spraggins <tas_at_virginia.edu>
Date: Mon 10 Jun 2002 12:13:01 -0400

This made it to my sent-mail, but I never saw it posted. So, in case this
got lost, here's my repeated request for hints.

Thanks.

Tom Spraggins
tas_at_virginia.edu

-----Original Message-----
From: Thomas A. Spraggins [mailto:tas_at_virginia.edu]
Sent: Thursday, June 06, 2002 11:40 AM
To: amber_at_heimdal.compchem.ucsf.edu
Subject: xaLeap make fails on AIX



I'm having trouble making xaLeap for AIX. I found an archived message from
Bill Ross describing exactly the trouble I'm having -- see below.

However, the recommendation is to "fix Imake.conf, as described in
amber6/src/leap/0README". However "grep Imake.conf 0README" produces
nothing.

Can someone describe the fix for me?

Many thanks.

TOm Spraggins
tas_at_virginia.edu

P.S. There seems to be some confusion about amber7/src/leap vs.
amber7/src/leap/src/leap in the 0README, too.




AMBER Mail Reflector Archive Message
Subject: Re: amber6 compilation failure (fwd)

From: Bill Ross (ross_at_cgl.ucsf.edu)
Date: 03/20/01

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Date: Tue, 20 Mar 2001 13:40:51 -0800 (PST)
From: Bill Ross  <ross_at_cgl.ucsf.edu>
Message-Id: <200103202140.NAA56212_at_socrates.cgl.ucsf.edu>
Subject: Re:  amber6 compilation failure (fwd)
        We are trying to compile Amber 6.0 on our IBM RS/6000 SP system.
        However, we continue to get the error message given below after
        about 10 minutes of compilation.
        This is the end of the logfile from make:
        [...] stuff deleted
                rm -f utilMakeHelp
(This shows that Leap is the module being compiled.)
                cc_r -o utilMakeHelp -g -DMEMORY_DEBUG=0 -I..
                        -bnso -bI:/lib/syscalls.exp basics.o ...
                        ` ` -liconv -lIM -bI:/usr/lpp/X11/bin/smt.exp
                        -lm -bnodelcsect
        ld: 0711-224 WARNING: Duplicate symbol: last_key
        ld: 0711-224 WARNING: Duplicate symbol: next_key
        ld: 0711-224 WARNING: Duplicate symbol: .connect
These can probably be ignored.
        ld: 0711-345 Use the -bloadmap or -bnoquiet option to
                        obtain more information.
This is a clue for diagnosis - one could add these flags
in leap/src/leap/Makefile, however the problem is clear:
        ld: 0711-317 ERROR: Undefined symbol: thread_unlock
        ld: 0711-317 ERROR: Undefined symbol: thread_waitact
        ...
All this thread stuff is being added by the setup of the
X-windows compilation configuration - probably a single
unnecessary library is being specified that requires another
one concerning threads that is not given. Have your sysadmin
or vendor fix the xmkmf config file, Imake.conf, described in
amber6/src/leap/0README.
Bill Ross
Received on Mon Jun 10 2002 - 09:13:01 PDT
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