On Wed, May 01, 2002, Sue Heavner wrote:
I then went to the test directory , ran make
test.nmode, and recieved the following messages:
>
> cd nmode; ./Run.ala-dipeptide
>
> NMODE: find normal modes
> diffing vibs.out.save with vibs.out
> PASSED
...
> Then I went to the test/nmode directory but no files were created. When
> make test.<program-name> is run for other modules of amber output is found
> in the corresponding directories. Thanks in advance for any help on this
> subject.
All of the amber 7 tests *should* clean up after themselves when tests pass.
That is, if vibs.out.save is the same as vibs.out, the latter is removed;
hence it will look like no files were created. You can look at the *.save
files, however, to see output examples.
I hope others will have suggestions about the mm_pbsa problem.
...good luck...dac
--
==================================================================
David A. Case | e-mail: case_at_scripps.edu
Dept. of Molecular Biology, TPC15 | fax: +1-858-784-8896
The Scripps Research Institute | phone: +1-858-784-9768
10550 N. Torrey Pines Rd. | home page:
La Jolla CA 92037 USA | http://www.scripps.edu/case
==================================================================
Received on Wed May 01 2002 - 10:55:07 PDT
