Dear AMBER users,
I am trying to calculate RMSD of several structures and I get the
following error:
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- CARNAL -
AMBER 6.0
COORDINATE ANALYSIS
input analin
Reading parm file (../../f.top)
parm: opening ../../f.top
../../f.top title:
> FILES_IN
> STREAM s1
> f.500sd10kcgest.rest.0000
Using default parm (../../f.top) for STREAM s1
> f.500sd10kcgest.rest.0001
> f.500sd10kcgest.rest.0002;
stream: opening f.500sd10kcgest.rest.0001
stream: opening f.500sd10kcgest.rest.0002
stream: opening f.500sd10kcgest.rest.0000
> FILES_OUT
> TABLE tab1 rms_to_start;
> DECLARE
> GROUP gALL (RES 1 - 32);
** Group gALL: 527 atoms
> RMS r1 gALL s1;
RMS: comparing to initial set of stream
> OUTPUT
> TABLE tab1 r1;
Error: unexpected EOF in analin (3 char in line)
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Here is my input:
FILES_IN
STREAM s1
f.500sd10kcgest.rest.0000
f.500sd10kcgest.rest.0001
f.500sd10kcgest.rest.0002;
FILES_OUT
TABLE tab1 rms_to_start;
DECLARE
GROUP gALL (RES 1 - 32);
RMS r1 gALL s1;
OUTPUT
TABLE tab1 r1;
END
---------------------------------------------------------
Thank you in advance,
--omer
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Omer Katzenelson, Ph.D. katz_at_sdsc.edu
San Diego Supercomputer Center TEL: (858) 822-3690
9500 Gilman Dr., MC0527 FAX: (858) 822-3631
La Jolla CA 92093
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Received on Tue Aug 21 2001 - 18:27:54 PDT
