dear Marios,
It miss your parm.top and your traj.out files.
So you have to write
PATH/amber/exe/ptraj
parm.top
trajin traj.crd 1001 2000 1 (traj.crd have to be your trajectory file)
trajout traj.out
radial rdf_volume.xmgr 0.5 8.0 :25_at_CD1
go (you have to write this in order to execute your ptraj.exe)
Please don't send your email in html format if you want to have replies.
pascal
On Dec 27, 4:17am, Marios Philippopoulos wrote:
> Subject: using "radial" in PTRAJ
>
> [ Attachment (multipart/alternative): 1817 bytes ]
>-- End of excerpt from Marios Philippopoulos
--
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Pascal Bonnet pascal_at_qorws1.uab.es
Unitat Quimica Organica and Institut de Chimie Organique et Analytique
Facultat de Ciences UFR Sciences - UMR 6005
Universitat Autonoma de Barcelona Rue de Chartres - BP 6759
08193 Bellaterra (SPAIN) 45067 ORLEANS CEDEX 2 - France
Tel: 34935811266 Tel: 0238494577
Fax: 34935811265
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Received on Fri Mar 09 2001 - 09:26:17 PST
