Re: Parallelization on SGI for AMBER5

From: Nelson Brito <>
Date: Mon 27 Nov 2000 09:49:18 +0000 (WET)

On Sat, 25 Nov 2000, Sanjeev B.S. wrote:

> Hello,
> Can anyone let me know what is the specific step to parallize
> sander on SGI powerchallenge (6 processors)? I compiled it and but
> strangely it runs on 1 processor only. The OS is IRIX6.4

If you compile amber with Machine.sgi_mpi or .sgi_mpich? and you have
array service running, you just need to call sander with the number
of proc. you want: sander -np6 ...

bye, nelson
Received on Mon Nov 27 2000 - 01:49:18 PST
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