Parallelization on SGI for AMBER5

From: Sanjeev B.S. <>
Date: Sat 25 Nov 2000 00:29:22 +0400 (RET)

        Can anyone let me know what is the specific step to parallize
sander on SGI powerchallenge (6 processors)? I compiled it and but
strangely it runs on 1 processor only. The OS is IRIX6.4
Thanking in advance,

From 25 Nov 2000 17:00:11 -0000
Message-id: <>
Date: 25 Nov 2000 17:00:11 -0000
From: Raja Swaminathan <>
To: AMBER list <>
Subject: doubt in constant pressure simulations
In-Reply-to: <>

Hi amber users

I am facing problem like this in constant pressure simulations.

If ntp=2 is given i get the error message as Non-isotropic scaling is currently not supported.

Hence i have used ntp=1 (md with isotropic position scaling)

Is it ok I am using sander6 manual


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Received on Fri Nov 24 2000 - 12:29:22 PST
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