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From: Raja Swamynathan <kuchchi_at_yahoo.com>
Date: Mon 20 Nov 2000 07:30:03 -0800 (PST)

Hi amber users
I am Raja graduate student working on molecular
simulations.At present i am working on" NMR refinement
in explicit water solvent". (For an RNA duplex str)
In the first stage (ie) Minimize water and ions
i am facing the problem like this.

The job is running and the job stops in between
abruptly because of linmin failure. I have used the
input as given in the amber6 manual.

I don't know what is that problem.is it due to short
contacts in the model. i have given shake option also.


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Received on Mon Nov 20 2000 - 07:30:03 PST
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