From: Grzegorz Jezierski <>
Date: Fri 16 Jun 2000 16:44:32 +0200

While running SANDER (AMBER6.0) on 4 CPU's, on SGI (R10000), I get
empty files with velocities if the program has been compiled with the
MACHINE file: 'Machine.sgi' or, simulation fails if the program has been
compiled with 'Machine.sgi_mpi'.

In the latter case, the error messages look like:
mpirun must now be used to launch all MPI applications
namelist read (nrun): variable not in namelist
apparent state: unit 5 named
last format: namelist io
Unit 5 is a sequential formatted external file
*** Execution Terminated (119) ***
MPI: MPI_COMM_WORLD rank 0 has terminated without calling MPI_Finalize()
MPI: aborting job

Any hint is welcome.

              Grzegorz Jezierski
            Biophysics Department
        Institute of Molecular Biology
           Jagiellonian University
      al. Mickiewicza 3, 31-120 Krakow,
      phone:  (48 12) 634 13 05 ext. 291
Received on Fri Jun 16 2000 - 07:44:32 PDT
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