Dear AMBER users,
I have come across an error in compiling AMBER v6.0 on a multiprocessor
Origin 2000 machine. In the .bashrc file I had declared:
set AMBERHOME=/home/mphilip/progs/amber/amber6
export AMBERHOME
PATH=/usr/ucb:/usr/bin:/usr/sbin:$AMBERHOME/exe:
export PATH
Then in the amber6/src directory:
ln -s -f Machines/Machine.sgi MACHINE
make install
By this I was hoping to get the basic (serial) version of AMBER and then
recompile sander and gibbs linking to the Machine.sgi_mpi file.
The "basic" compilation went OK for the most part until I hit the point
just before the end of the "install" part of the /src/Makefile:
cd interface; ./install_ambint
At that point I got the error:
AMBERHOME - Undefined variable
***Error code 1 (bu21)
Upon looking at the exe directory, I find that the executable
"interface" has been
produced just fine, and it is the most recently produced.
My questions are:
- Am I missing any more executables?
- Did I define the AMBERHOME variable correctly in the .bashrc file?
Thank you for any advice.
Sincerely,
Marios Philippopoulos
--
Marios Philippopoulos, PhD
Structural Biology and Biochemistry Programme
Hospital for Sick Children
555 University Avenue
Toronto Ontario Canada M5G 1X8
mphilip_at_sickkids.on.ca
Received on Thu Feb 10 2000 - 08:00:03 PST
