About periodic box & modification of sander(5.0)

From: B <watanabe-katsuhiro_at_hitachi-ul.co.jp>
Date: Thu 20 Jan 2000 09:29:04 +0900

dear all amber users

does anyone know about this question ?
my question is...

when i did mdrun in high temperature periodic box to unfold protein, i
found that
   a part of a protein had been out of the box.
   any influence for protein system from this phenomenon?

thank you in advance.

katsuhiro watanabe
hitachi-ulsi systems.co.ltd
Received on Wed Jan 19 2000 - 16:29:04 PST
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