Amber Archive Dec 2025 by thread

16 messages: Starting Tue Dec 02 2025 - 09:00:03 PST, Ending Thu Dec 11 2025 - 23:00:02 PST
This period: Most recent messages
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[AMBER] Custom Caps in AMBER and Compatibility with GROMACS Xenidis, Vasilis via AMBER (Tue Dec 02 2025 - 08:41:40 PST)
- Re: [AMBER] Custom Caps in AMBER and Compatibility with GROMACS Carlos Simmerling via AMBER (Tue Dec 02 2025 - 08:55:32 PST)
- Re: [AMBER] Custom Caps in AMBER and Compatibility with GROMACS Téletchéa Stéphane via AMBER (Tue Dec 02 2025 - 09:38:11 PST)
[AMBER] LINMIN failure Sangita Kachhap via AMBER (Wed Dec 03 2025 - 07:12:06 PST)
[AMBER] Request download AmberTools24 source code Arsene Marian Alain via AMBER (Thu Dec 04 2025 - 01:21:21 PST)
- Re: [AMBER] Request download AmberTools24 source code David A Case via AMBER (Sat Dec 06 2025 - 10:03:27 PST)
[AMBER] Question: Box size change during parametrization of rbLDH in 1M trehalose cai.hanfeng--- via AMBER (Fri Dec 05 2025 - 10:55:44 PST)
- Re: [AMBER] Question: Box size change during parametrization of rbLDH in 1M trehalose Arun Srikanth via AMBER (Fri Dec 05 2025 - 12:25:00 PST)
- Re: [AMBER] Question: Box size change during parametrization of rbLDH in 1M trehalose David A Case via AMBER (Sat Dec 06 2025 - 10:15:37 PST)
[AMBER] Radius of phosphate Reza Khayat via AMBER (Fri Dec 05 2025 - 12:01:05 PST)
- Re: [AMBER] Radius of phosphate David A Case via AMBER (Sat Dec 06 2025 - 10:06:59 PST)
[AMBER] Calculating a dot product between eigenvectors Osman, Roman via AMBER (Wed Dec 10 2025 - 19:29:58 PST)
- Re: [AMBER] Calculating a dot product between eigenvectors Daniel Roe via AMBER (Thu Dec 11 2025 - 05:40:36 PST)
[AMBER] Error: Bad topology file. Sum of ATOMS_PER_MOLECULE does not equal NATOM Siavoush Dastmalchi via AMBER (Thu Dec 11 2025 - 04:34:39 PST)
[AMBER] &wt type='rest' not applied in Amber22 pmemd.cuda Emme Burgin via AMBER (Thu Dec 11 2025 - 08:36:38 PST)
[AMBER] pmemd.cuda.MPI run stops (amber24) Dulal Mondal via AMBER (Thu Dec 11 2025 - 22:51:05 PST)