[AMBER] ASMD simulation of protein-protein complex

From: Prithviraj Nandigrami via AMBER <amber.ambermd.org>
Date: Fri, 1 Aug 2025 12:31:14 -0400

Dear AMBER Users and Experts,

I am reaching out requesting your input regarding a good place to start at
while simulating ASMD simulations of a protein-protein complex? I am in the
process of parameterizing the system (where one protein is pulled at a
constant/variable rate) from the other protein (starting from a bound
complex).

Any input would be greatly appreciated. Thank you for your time.

Sincerely,
Prithviraj Nandigrami
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Received on Fri Aug 01 2025 - 10:00:03 PDT
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