[AMBER] Announcement: Release of DOCK 6.13

From: Scott Brozell via AMBER <amber.ambermd.org>
Date: Wed, 16 Jul 2025 17:33:54 -0400

We are pleased to announce the release of DOCK 6.13.

DOCK is a suite of programs for molecular docking.
The source code for DOCK 6.13 is available for download and free
for academic users at https://dock.compbio.ucsf.edu/DOCK_6/index.htm

This release includes new methods for de novo design:
new biasing algorithms in DOCK_DN enable the prioritization of both
fragments and torsions. Combined with parallel-based clustering and
pruning algorithms that enable the efficient removal of duplicate
molecules during growth, these approaches lead to ensembles
with more drug-like characteristics. A number of incremental
improvements are also available in this release notably for
DOCK's genetic algorithm DOCK_GA and for Descriptor Score.

For full information on what is new in DOCK 6.13, please visit:

      https://dock.compbio.ucsf.edu/DOCK_6/new_in_6.13.txt

Sincerely,

The DOCK Team

Please visit us at the DOCK Web site.
https://dock.compbio.ucsf.edu


_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Wed Jul 16 2025 - 15:00:02 PDT
Custom Search