On Tue, Jun 24, 2025, David Case wrote:
>
>>Hello all ,i am new to this field in computational chemistry and i want to
>>learn md simulation using AMBER,i am finding it difficult to learn it from
>>the manually as all the steps are given differently can somebody help me
>>with the tutorial part please.
>
>I would suggest starting with tutorial 5.1: you can get this by going to
>https://ambermd.org, clicking on the Tutorials tab, and choosing 5.1, "simple
>simulation of alanine dipeptide".
>
Update: what I said above is not really wrong, but there is an even better
path: Click on the Tutorials tab, then look a the "New Users" section, and
click on the link there. That will give you some good background
information. Scroll down to "Case Studies", and the suggested starting
point is the tutorial I cited above.
....dac
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Received on Tue Jun 24 2025 - 11:30:02 PDT
