[AMBER] Regarding QM-MM error:

From: Kankana Bhattacharjee via AMBER <amber.ambermd.org>
Date: Mon, 6 Jan 2025 12:43:39 +0530

Dear AMBER users,

I am getting this error while running the QM-MM calculation. This is the
error:
 ERROR: QM region + cutoff larger than box dimension:
  QM-MM Cutoff = 8.0000
   Coord Lower Upper Size Radius of largest sphere inside unit
cell
     X -13.174 13.219 26.393 11.536
     Y -14.552 12.950 27.501 11.536
     Z -12.626 12.694 25.320 11.536
  ****************************************************
 SANDER BOMB in subroutine QM_CHECK_PERIODIC<qm_mm.f>
 QM region + cutoff larger than box
 cannot continue, need larger box.
  The box dimension is 10 angstrom. The cut-off is 8 angstrom.
I am attaching the qmmm.in file herewith. Kindly suggest. Shoudl I hav
eto make the bix dimension something like 12 or 15 angstrom ? Initially, I
tried with cutoff as 10 angstrom, but it dint work during equilibration
thats why hasd to make the cutoff as 8 angstrom and then it successfully
ran. Kindly suggest.

Thanks & Regards
Kankana Bhattacharjee


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Received on Sun Jan 05 2025 - 23:30:01 PST
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