[AMBER] TI calculations

From: VERONICA MARTIN HERNANDEZ via AMBER <amber.ambermd.org>
Date: Fri, 13 Dec 2024 09:36:20 +0000

Dear Amber users

I'm performing TI calculations, and I've got more like a methodological question. I'm replacing a hydrogen to a fluorine, but both atoms have to share the same xyz coordinates? Because the distance carbon-hydrogen and carbon-fluorine aren't the same, so, to me, it's not logic that both atoms have the same coordinates, but I don't know

Best regards
Vero
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Received on Fri Dec 13 2024 - 02:00:02 PST
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