Re: [AMBER] Cpptraj: is it possible to perform 2D RMSD analysis from average data of several simulations?

From: Carlos Simmerling via AMBER <amber.ambermd.org>
Date: Mon, 11 Nov 2024 06:21:22 -0500

You can include multiple trajin filr. I am not sure what you mean by
averaged. Since the axes of the plot are frame number or time, there is no
averaging.

On Mon, Nov 11, 2024, 5:35 AM Nikolay Kuzmich via AMBER <amber.ambermd.org>
wrote:

> Dear Amber users and developers,
> I wanted to ask you if it is possible to get 2D RMSD matrix averaged from
> several independent production runs.
> Kind regards
> Nick
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Received on Mon Nov 11 2024 - 03:30:02 PST
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