On Tue, Aug 20, 2024, Dulal Mondal via AMBER wrote:
>I am trying to install amber19. I do the following steps.
>./configure --with-python /home/srabani/miniconda3/bin/python3 gnu
>source amber.sh
>make install
>But I give the following error.
>pytraj/topology/topology.cpp:47594:19: note: suggested alternative:
>‘_PyGen_yf’
> ret = _PyGen_Send((PyGenObject*)yf, NULL);
> ^~~~~~~~~~~
> _PyGen_yf
>error: command '/usr/local/gcc-7.3.0/bin/gcc' failed with exit code 1
This may be tough to figure out. I'm assuming that you have the combination
of Amber18 and AmberTools19. These are half a decade old, and use a build
system we no longer maintain. You could try commenting out the pytraj build
in the AmberTools Makefile.
But, much better, in my view, is to just get the current releases, Amber24
and AmberTools24. There have been many improvements and bug-fixes in the
past six years.
...good luck...dac
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Tue Aug 20 2024 - 09:30:02 PDT
