Dear AMBER Users and Experts,
Just wanted to follow-up on this. Please advise if AMBER has any strategy
to simulate a membrane protein within a pH gradient (by setting different
pH conditions for different regions of the protein).
Thank you in advance.
Sincerely,
-PN
On Tue, Aug 6, 2024 at 3:34 PM Prithviraj Nandigrami <
prithviraj.nandigrami.gmail.com> wrote:
> Dear AMBER Users and Experts,
>
> I am trying to simulate the dynamics of a membrane protein embedded in a
> lipid bilayer. I was wondering if it is possible to simulate such a system
> at two different pH conditions for the extracellular and intracellular
> regions?
>
> Any help and guidance would be much appreciated.
>
> Best regards,
> -PN
>
>
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Mon Aug 12 2024 - 10:30:02 PDT
