Hi,
On Thu, Jul 11, 2024 at 1:55 PM Nil Mu via AMBER <amber.ambermd.org> wrote:
> /var/spool/scratch/shokhen/US4_Gln391_Gly_Gly_Ser627
> > pdb4amber -i US4_Gly_Gly_nh.pdb -o US4_Gly_Gly_reduced.amber.pdb --dry –reduce
I'm not sure if this is just an encoding error in the email or if you
pasted the command from somewhere, but the command line flag should be
'--reduce' with two dashes (the way you have '--dry' specified), not a
single long dash. Try using '--reduce' instead.
-Dan
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Fri Jul 12 2024 - 06:00:02 PDT
