Re: [AMBER] Amber force fields for 5-Methylcytosine Nucleotide RNA

From: SATYAJIT KHATUA via AMBER <amber.ambermd.org>
Date: Tue, 7 May 2024 14:38:02 +0000

Hi,

Look into the nucleic acid section of http://amber.manchester.ac.uk/ if you find anything. There is one deoxy 5-Methylcytosine parameters. But I don't know if that is what you enquired about.

Best,
Satyajit
________________________________
From: Penumutchu, Srinivasa via AMBER <amber.ambermd.org>
Sent: Tuesday, May 7, 2024 10:26:28 AM
To: amber.ambermd.org <amber.ambermd.org>
Subject: [AMBER] Amber force fields for 5-Methylcytosine Nucleotide RNA

Dear all,

 I'm reaching out to request force field parameters for Naturally Occurring Modified Nucleosides in RNA. More specifically, looking for 5-Methylcytosine Nucleotide for RNA.

Could you kindly share a valid link or resource from which I can download these parameters?.

Regards,

 Vas

_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Tue May 07 2024 - 08:00:02 PDT
Custom Search