Hi,
It's not clear from your message what your issue is. Are you receiving
some kind of error or warning message? Are you not getting the output
you expect?
If you're running this interactively (i.e. you're not using this as a
script), make sure you type 'run' to actually start trajectory
processing.
-Dan
On Wed, Apr 10, 2024 at 9:32 AM 百毒不侵√ via AMBER <amber.ambermd.org> wrote:
>
> Hi:
>
>
> I now have 500 frames of top and crd files, and I'm using rms command to align these frames. However, it seems to be invalid to use of the rms command. what should I do to solve this problem? The following are my scripts.
>
>
> parm pro.top
> trajin pro.crd 1 500
> rms first .CA,C,N,O
> trajout pro.pdb multi
>
>
> Thank you so much for your help
> I now have 500 frames of top and crd files, now using rms command for internal alignment, but can not output the aligned pdb, what should I do
>
> 百毒不侵√
> 3121063212.qq.com
>
>
>
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
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Received on Wed Apr 10 2024 - 07:00:02 PDT
