Re: [AMBER] Error while running minimization

From: David A Case via AMBER <amber.ambermd.org>
Date: Mon, 8 Apr 2024 08:42:41 -0500

On Sat, Apr 06, 2024, AMANPREET KAUR via AMBER wrote:

>I am running the minimization of whole system in MD using the command:
>*sander* *-O -i minD2.in -o minD2.out -p solv_3A2_noh.com.prmtop -c
>solv_3A2_noh.com.rst7 -r minD2.ncrst -ref solv_3A2_noh.com.rst7 *but the I
>am encountering the the error
>
>Program received signal SIGSEGV: Segmentation fault - invalid memory
>reference.

Unfortunately, a segfault message provides little useful information. Set
nstlim=0 and ntpr=1 to examine the initial structure, and see if that gives
any hints about what is going wrong.

...dac


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Received on Mon Apr 08 2024 - 07:00:02 PDT
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