[AMBER] antechamber - running sqm in parallel

From: Giorgos Lambrinidis via AMBER <amber.ambermd.org>
Date: Mon, 1 Apr 2024 11:11:22 +0300

Hi,

I have a peptide-ligand with 350 atoms. I run the antechamber to calculate
charges (AM1 method) but it takes more than 10 hours on AMD 9 using only
one CPU....
Is there any way to run the sqm in parallel to save time?

Best Regards
Dr George Lamprinidis


-- 
“Good judgement is the result of experience and experience the result of
bad judgement.”
― Mark Twain
---------------------------------------------
Dr George Lambrinidis
Researcher & Laboratory Assistant Staff
School of Health Sciences
Faculty of Pharmacy
National & Kapodistrian University of Athens
Greece
tel:  +30 2107274304
      +30 2107274521
fax:  +30 2107274747
e-mail: lambrinidis.pharm.uoa.gr
               geolampr.gmail.com
---------------------------------------------
Guest editor of the Special Issues:
"Recent Advances in Drug Design" in "Molecules"
https://www.mdpi.com/journal/molecules/special_issues/Advance_Drug_Design
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Mon Apr 01 2024 - 01:30:02 PDT
Custom Search