Re: [AMBER] Sander.mpi haults at 999 steps

From: David A Case via AMBER <amber.ambermd.org>
Date: Fri, 1 Mar 2024 18:29:59 -0700

On Tue, Feb 27, 2024, Montalvillo, Fernando via AMBER wrote:

>I installed Amber20 with AmberTools23 (i don't know if that is a
>problem).

I'm not sure if this is relevant to your problem,, but Amber20 should not be
installed with AmberTools23. I suggest you upgrade to Amber22, which is
compatible with AmberTools23.

>
>#!/bin/bash
>#SBATCH --job-name=ti_ligands
>#SBATCH --nodes=1
>#SBATCH --ntasks=16

    Try a job with ntasks=2, just to see if anything changes

>#SBATCH --partition=torabifard
>#SBATCH --time=48:00:00
>#SBATCH --output=ti_complex_%j.out
>#SBATCH --error=ti_complex_%j.err

Did you examine the .out and .err files?

....dac


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Received on Fri Mar 01 2024 - 18:00:02 PST
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