Dear Aiton,
Mostly problem will be some files of nvidia gcc did cot compile with conda forge.You can try to install it with old configuration using cuda 11.0 and also it may need some programs like netcdf,hdf.the details are given in the text file.
Regards,
Sivasanker K A
NCL ID-12183
c/o Dr. Kumar Vanka
Physical & Material Chemistry
CSIR NCL Pune
----- Original Message -----
From: amber.ambermd.org
To: amber.ambermd.org
Sent: Tuesday, January 23, 2024 7:22:46 AM
Subject: [AMBER] fatal error: Windows.h: No such file or directory
Hello Amber Folks,
I deployed Amber22 with Ubuntu 20.04 and the same CMAKE options as below for another client and it installed/worked.
My current client has a very similar setup (Amber22, Ubuntu 20.04, Nvidia 525), yet running ./run_cmake fails with:
/home/*******/Downloads/amber22_src/build/CMakeFiles/CMakeTmp/CheckIncludeFile.c:1:10: fatal error: Windows.h: No such file or directory
1 | #include <Windows.h>
| ^~~~~~~~~~~
compilation terminated.
Not sure why it would be looking for a Windows header file or why it wants to fail there instead of just a warning. I tried the possible resolutions on this thread with no luck:
http://archive.ambermd.org/202212/0092.html
Here’s my new system’s info. Let me know if you'd like any other information:
cmake $AMBER_PREFIX/amber22_src \
-DCMAKE_INSTALL_PREFIX=/opt/amber22 \
-DCOMPILER=GNU \
-DNCCL=TRUE \
-CUDA_TOOLKIT_ROOT_DIR=/usr/local/cuda \
-DMPI=TRUE -DCUDA=TRUE -DINSTALL_TESTS=TRUE \
-DDOWNLOAD_MINICONDA=TRUE \
2>&1 | tee cmake.log
+-----------------------------------------------------------------------------+
| NVIDIA-SMI 525.125.06 Driver Version: 525.125.06 CUDA Version: 12.0 |
|-------------------------------+----------------------+----------------------+
| GPU Name Persistence-M| Bus-Id Disp.A | Volatile Uncorr. ECC |
| Fan Temp Perf Pwr:Usage/Cap| Memory-Usage | GPU-Util Compute M. |
| | | MIG M. |
|===============================+======================+======================|
| 0 NVIDIA GeForce ... Off | 00000000:41:00.0 On | N/A |
| 0% 50C P8 22W / 270W | 398MiB / 8192MiB | 0% Default |
| | | N/A |
+-------------------------------+----------------------+----------------------+
+-----------------------------------------------------------------------------+
| Processes: |
| GPU GI CI PID Type Process name GPU Memory |
| ID ID Usage |
|=============================================================================|
| 0 N/A N/A 1793 G /usr/lib/xorg/Xorg 71MiB |
| 0 N/A N/A 2587 G /usr/lib/xorg/Xorg 186MiB |
| 0 N/A N/A 2767 G /usr/bin/gnome-shell 113MiB |
| 0 N/A N/A 2862 G ...mviewer/tv_bin/TeamViewer 12MiB |
Thanks for the help!
- Jesse
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Received on Mon Jan 22 2024 - 21:30:02 PST
