[AMBER] TLEaP question

From: Matthew Guberman-Pfeffer via AMBER <amber.ambermd.org>
Date: Thu, 7 Dec 2023 10:04:47 -0600

Dear Amber Community,

I have a protein with two copies of the same cofactor, one in the reduced state and the other in the oxidized state. I have frcmod files for each redox state. How can I apply the reduced-state frcmod to the reduced-state copy of the cofactor and the oxidized-frcmod to the oxidized-state copy of the cofactor in the same structure?

Best,
Matthew


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Received on Thu Dec 07 2023 - 08:30:02 PST
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