[AMBER] Are forcefields valid under high pressures

From: Matthew Guberman-Pfeffer via AMBER <amber.ambermd.org>
Date: Fri, 12 May 2023 15:56:04 -0400

Dear AMBER community,

Can force fields be trusted to simulate elevated pressure-induced conformational effects?

I’ve seen this done for pulling simulations, but what I have in mind here is to simulate the effects of compressing a protein between two surfaces (molecular junctions). Does this seem like a valid use of MD?

Best,
Matthew
 
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Received on Fri May 12 2023 - 13:00:02 PDT
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