[AMBER] CpHMD, advice

From: Matthew Guberman-Pfeffer via AMBER <amber.ambermd.org>
Date: Tue, 9 May 2023 09:07:16 -0400

Dear AMBER Community,

I am posed with the question of which ligand for my system detaches from a metal center to pick up a proton. The strategy suggested to me was to run CpHMD simulations using a non-bonding model of the metal active site. What do you think of this approach? Is this likely to give me something sensible?

Best,
Matthew


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Received on Tue May 09 2023 - 06:30:02 PDT
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