Re: [AMBER] Problem loading pdb4amber in Amber 20

From: Hai Nguyen via AMBER <amber.ambermd.org>
Date: Fri, 17 Mar 2023 17:35:21 -0400

On Fri, Mar 17, 2023 at 12:20 PM Joanna Michelle E. Chua via AMBER <
amber.ambermd.org> wrote:

> Hi all,
>
> Can anyone help me regarding this one? I had no problem loading
> antechamber, tleap, xleap,
>
> itsrdc.itsrdc:~/amber20$ pdb4amber -h
> Traceback (most recent call last):
> File "/home/itsrdc/amber20/bin/pdb4amber", line 33, in <module>
> sys.exit(load_entry_point('pdb4amber==20.1', 'console_scripts',
> 'pdb4amber')())
> File "/home/itsrdc/amber20/bin/pdb4amber", line 22, in
> importlib_load_entry_point
> for entry_point in distribution(dist_name).entry_points
> File
> "/home/itsrdc/amber20/miniconda/lib/python3.9/importlib/metadata.py", line
> 524, in distribution
> return Distribution.from_name(distribution_name)
> File
> "/home/itsrdc/amber20/miniconda/lib/python3.9/importlib/metadata.py", line
> 187, in from_name
> raise PackageNotFoundError(name)
> importlib.metadata.PackageNotFoundError: pdb4amber


Hi

I don’t know why this happens again but you can try similar approach to
resolve:
http://archive.ambermd.org/202010/0110.html

Or try to install ambertools from conda distribution.

Hai

>
>
> Thank you for helping me out.
>
> Joanna Michelle Chua-Aniago, RPh
> Science Research Specialist II
> Isotope Techniques Section
> Nuclear Services Division
> Philippine Nuclear Research Institute
> Tel. no. (+632) 8929 6011 to 14 loc. 240
> Mobile No. (+63) 917 845 4137
> ________________________________
>
> CONFIDENTIALITY NOTICE: This email, including its attachments, is meant
> for the use of the person/s it is addressed to. It may contain personal
> data, or confidential or privileged information protected from unauthorized
> use or disclosure by law. If you are not the intended recipient, please be
> informed that the copying, disseminating, disclosing, or acting based on
> the information contained herein is strictly prohibited. Please contact the
> sender immediately and permanently delete this email, including its
> attachments from your system.
>
>
> Unless indicated, this email and/or its attachment/s does not reflect the
> view or policies of the Philippine Nuclear Research Institute.
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Fri Mar 17 2023 - 15:00:02 PDT
Custom Search